Hypobetalipoproteinemia Gene Panel, Varies
Use
The Hypobetalipoproteinemia Gene Panel provides a genetic evaluation for patients with a personal or family history suggestive of familial hypobetalipoproteinemia. This test utilizes next-generation sequencing to detect single nucleotide and copy number variants in five genes associated with this condition: ANGPTL3, APOB, MTTP, PCSK9, and SAR1B. Identifying a disease-causing variant can assist with diagnosis, prognosis, clinical management, familial screening, and genetic counseling for familial hypobetalipoproteinemia.
Special Instructions
Not provided.
Limitations
Next-generation sequencing may not detect all genomic variants. False-negative or false-positive results can occur due to variable depth of coverage. Some target regions may not meet assay performance criteria, risking inadequate evaluation. Approximately 95% of deletions up to 75 bp and insertions up to 47 bp can be detected. Structural rearrangements like translocations may not be identified. Low mosaicism levels and distinction between somatic and germline mutations are undetectable. Regions with homology, high GC content, or repetitiveness pose technical challenges.
Methodology
NGS (Targeted)
Biomarkers
LOINC Codes
- 51966-0 - Gene dis DNA anl Pnl
- 62364-5 - Test performance info Spec
- 31208-2 - Specimen source
- 50397-9 - Mol dx interp Bld/T Ql
- 82939-0 - Genetic variant details Bld/T
- 69047-9 - Geneticist review
- 48767-8 - Annotation comment Imp
- 85069-3 - Lab test method
- 48018-6 - Gene studied ID
- 18771-6 - Provider signing name
Result Turnaround Time
21-28 days
Related Documents
For more information, please review the documents below
Specimen
Whole Blood
Volume
3 mL
Minimum Volume
Not provided
Container
Lavender top (EDTA) or yellow top (ACD) (Preferred), Green top (Sodium heparin) (Acceptable)
Collection Instructions
Invert several times to mix blood. Send whole blood in original tube. Do not aliquot. Whole blood from umbilical cord postnatal is acceptable.
Patient Preparation
A previous hematopoietic stem cell transplant from an allogenic donor will interfere with testing.
Stability Requirements
| Temperature | Period |
|---|---|
| Room Temperature | 4 days |
| Refrigerated | 4 days |
| Frozen | 4 days |
