Lynch Syndrome Panel, Varies
Use
This test is used for establishing a diagnosis of Lynch syndrome or constitutional mismatch repair deficiency, which allows for targeted cancer surveillance based on associated risks. It identifies variants in the genes MLH1, MSH2, MSH6, PMS2, or EPCAM, facilitating predictive testing in family members. The identification of disease-causing variants may assist with diagnosis, prognosis, clinical management, familial screening, and genetic counseling for Lynch syndrome.
Special Instructions
Not provided.
Limitations
Next-generation sequencing may not detect all types of genomic variants. False-negative or false-positive results may occur, and there may be regions of genes that cannot be effectively evaluated due to technical limitations. A negative result does not rule out a genetic disorder diagnosis. The test is not designed to detect low levels of mosaicism or differentiate between somatic and germline variants. The test cannot reliably detect deletions-insertions larger than 40 bp.
Methodology
NGS (Targeted)
Biomarkers
LOINC Codes
- 105197-8 - HNPCC multi Bld/T
- 62364-5 - Test performance info Spec
- 31208-2 - Specimen source
- 50397-9 - Mol dx interp Bld/T Ql
- 82939-0 - Genetic variant details Bld/T
- 69047-9 - Geneticist review
- 99622-3 - Patient resource info
- 48767-8 - Annotation comment Imp
- 85069-3 - Lab test method
- 48018-6 - Gene studied ID
- 18771-6 - Provider signing name
Result Turnaround Time
21-28 days
Related Documents
For more information, please review the documents below
Specimen
Whole Blood
Volume
3 mL
Minimum Volume
1 mL
Container
Lavender top (EDTA) or yellow top (ACD), acceptable: green top (Sodium heparin)
Collection Instructions
Invert several times to mix blood. Send whole blood specimen in the original tube. Do not aliquot.
Patient Preparation
A previous bone marrow transplant from an allogenic donor will interfere with testing.
Stability Requirements
| Temperature | Period |
|---|---|
| Room Temperature | 4 days |
| Refrigerated | 4 days |
| Frozen | 4 days |
